[ver] version 2.3.1

Author: progistar

src/main/java/progistar/pXg/constants/Constants.java

@@ -7,7 +7,7 @@ public class Constants {
 	// minor: critical bug fix, change in results something like that.
 	// patch: tiny bug fix, typo, and change code styles something like that.
 	public static final String VERSION = "pXg v2.3.1";
-	public static final String RELEASE = "(release 2024-07-22)";
+	public static final String RELEASE = "(release 2024-07-29)";
 	public static final String INTRODUCE = "Seunghyuk Choi and Eunok Paek in the Department of Computer Science at Hanyang University in Seoul, South Korea. ";
 	public static final String PMID = "38403075";
 

src/main/java/progistar/pXg/constants/Parameters.java

@@ -85,7 +85,7 @@ public class Parameters {
 	public static final String CMD_CANDIDATE_RANK	=	"--rank".toLowerCase();
 	public static int psmRank						=	100;
 
-	public static final String pParserRegExr		=	"aareg".toLowerCase();
+	public static final String pParserRegExr		=	"--aareg".toLowerCase();
 	public static String peptideParserRegExr		=	"[A-Z]"; // read sequence matched to the RegExr.
 	// Note that
 	// comment is different from field.