Craft file and KSP.log
https://web.tresorit.com/l/vSn4u#hHDK6nw9OV-bEwXskwKBnw
https://i.imgur.com/mFSFxAr.png
After grappling the PMA on the unity assembly, undock the bottom docking port from the shuttle. For some reason the control changes from the shuttle cockpit to something else (I haven't narrowed down which part becomes the control). You'll have to switch control back to the shuttle cockpit. Then when you try to make the top docking port on the unity assembly the effector, Easy Robotics says no.