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adding H5MDWriter to H5MD.py (#3189)
Fixes #2866 ## Work done in this PR - Adds H5MDWriter - Adds entry on ts.data to Timestep documentation - Adds duecredit entries to H5MD reader & writer
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package/CHANGELOG

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@@ -203,6 +203,7 @@ Enhancements
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checking if it can be used in parallel analysis. (Issue #2996, PR #2950)
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* Improved performance of H5MDReader by using h5py.Dataset.read_direct()
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to transfer data from HDF5 file into timestep. (PR #3293)
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* Added `H5MDWriter` to coordinate writers (Issue #2866, PR #3189)
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Changes
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* NCDFWriter now allows for the writing of `scale_factor` attributes for
@@ -314,10 +315,10 @@ Deprecations
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* Deprecated the `bfactors` topology attribute in favour of `tempfactors`.
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In 2.0 `bfactors` is simply an alias of `tempfactors`; in 3.0 `bfactors`
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will be removed. (Issue #1901, PR #3345)
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* The attributes `p_components`, `variance`, `cumulated_variance` and
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`mean_atoms` in `analysis.pca.PCA` are now deprecated in favour of
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`results.p_components`, `results.variance`, `results.cumulated_variance`
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and `results.mean_atoms`. They will be removed in 3.0.0
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* The attributes `p_components`, `variance`, `cumulated_variance` and
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`mean_atoms` in `analysis.pca.PCA` are now deprecated in favour of
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`results.p_components`, `results.variance`, `results.cumulated_variance`
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and `results.mean_atoms`. They will be removed in 3.0.0
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(Issues #3275 #3285)
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* The `bins`, `edges`, `count`, `rdf` attributes for `analysis.rdf.InterRDF`
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and `analysis.rdf.InterRDF_s`, and `cdf` attributes for

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