Skip to content

Setting \rho without tip labels in tree.kernel() generates strange outputs  #136

@ArtPoon

Description

@ArtPoon

\rho is supposed to control whether the kernel matches exclusively subtrees (all the way to the tips) or subset trees. Setting rho=0 should result in a subtree kernel. The resulting scores are failing normalization --- sqrt(k(t1,t1) * k(t2,t2)) is less than k(t1,t1).

Metadata

Metadata

Assignees

No one assigned

    Labels

    Type

    No type

    Projects

    No projects

    Milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions