can i set multi core to accelarate the align process of calculation

[ZennFangZhou]

i have the trajectory which is more than 50000 cells and 2000 genes, will spend more time on align process.

[dinithins]

@amateur-boy Thanks for your query. Yes, you can try the concurrent mode by calling the main alignment function as below. (It will automatically detect the number of cores in the system).
aligner.align_all_pairs(concurrent=True)
You can also tell a specific number of cores to use, for instance:
aligner.align_all_pairs(concurrent=True, n_processes=24)