From f3468e85a55362ab9b3450145b1a028572bb4329 Mon Sep 17 00:00:00 2001 From: xdai Date: Wed, 28 Jun 2023 16:44:09 +0000 Subject: [PATCH 1/2] update alphafold weight and uniref30 download links --- scripts/download_alphafold_params.sh | 2 +- scripts/download_uniref30.sh | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/scripts/download_alphafold_params.sh b/scripts/download_alphafold_params.sh index 51966e6fa..ff96ff4f6 100755 --- a/scripts/download_alphafold_params.sh +++ b/scripts/download_alphafold_params.sh @@ -31,7 +31,7 @@ fi DOWNLOAD_DIR="$1" ROOT_DIR="${DOWNLOAD_DIR}/params" -SOURCE_URL="https://storage.googleapis.com/alphafold/alphafold_params_2022-01-19.tar" +SOURCE_URL="https://storage.googleapis.com/alphafold/alphafold_params_2022-12-06.tar" BASENAME=$(basename "${SOURCE_URL}") mkdir --parents "${ROOT_DIR}" diff --git a/scripts/download_uniref30.sh b/scripts/download_uniref30.sh index 12e520724..938c13c09 100755 --- a/scripts/download_uniref30.sh +++ b/scripts/download_uniref30.sh @@ -31,7 +31,7 @@ fi DOWNLOAD_DIR="$1" ROOT_DIR="${DOWNLOAD_DIR}" -SOURCE_URL="http://wwwuser.gwdg.de/~compbiol/colabfold/uniref30_2103.tar.gz" +SOURCE_URL="https://wwwuser.gwdg.de/~compbiol/colabfold/uniref30_2202.tar.gz" BASENAME=$(basename "${SOURCE_URL}") mkdir --parents "${ROOT_DIR}" From ea86703c87a9f6567a9e9990a029ba18e11cb621 Mon Sep 17 00:00:00 2001 From: xdai Date: Wed, 28 Jun 2023 17:45:46 +0000 Subject: [PATCH 2/2] revert the alphafold download links to avoid download multimer weights --- scripts/download_alphafold_params.sh | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/scripts/download_alphafold_params.sh b/scripts/download_alphafold_params.sh index ff96ff4f6..51966e6fa 100755 --- a/scripts/download_alphafold_params.sh +++ b/scripts/download_alphafold_params.sh @@ -31,7 +31,7 @@ fi DOWNLOAD_DIR="$1" ROOT_DIR="${DOWNLOAD_DIR}/params" -SOURCE_URL="https://storage.googleapis.com/alphafold/alphafold_params_2022-12-06.tar" +SOURCE_URL="https://storage.googleapis.com/alphafold/alphafold_params_2022-01-19.tar" BASENAME=$(basename "${SOURCE_URL}") mkdir --parents "${ROOT_DIR}"