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lines changed Original file line number Diff line number Diff line change 11# Refcode List Generator
22
33## Summary
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45A script that allows you to create refcode lists (or CSV files of properties for a refcode list) for simple properties. The advantage of the script is
56that the control is via an easy to read file so you can keep an interprettable record of how a test set was generated in research. You can also then
67reproduce the list, or indeed run it on a new database and update it with the same conditions.
78
89### Relevance
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911We want research to be FAIR (Findable, Attributable, Interoperable and Reproducible) - this script means we can create a simple decscription of the
1012test set used that any researcher could then reproduce from the script and the description.
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@@ -20,14 +22,18 @@ test set used that any researcher could then reproduce from the script and the d
2022- CSD-Core
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2224## Instructions on Running
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2326### Linux command line
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2428- load the CSD Python API Miniconda environment
2529- create a text control file with the various control lines specified
2630- call Python to read the script and specify necessary arguments
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2732~~~
28- $ python refcodes_with_properties.py --help
33+ python refcodes_with_properties.py --help
2934~~~
30- The above will print an extended help message that describes the registered
35+
36+ The above will print an extended help message that describes the registered
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3238You can run the script with an Example file. Results are printed by default and can be redirected to be saved in an output file, e.g.
3339~~~
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