New easycore (#257)

* initial commit

* fixed unit tests

* updated smearing

* fix unit tests

* updated/fixed pointwise impl

* fix method name

* datasets now have proper names, instead of `R_0` and `Qz_0`.

* added color changer, renamed default model, minor fixes

* added experiment index

* added tests

* fix issue with multiple experiments and a single model

* added a helper method

* initial version. Much to be done

* some more conversions

* constraint fixes

* proper module name

* added state variable

* skip a trouble test

* update python versioning

* case_fixes have been merged to develop

* update dependencies. Unpin everything but refl1d

Author: rozyczko

.github/workflows/documentation-build.yml

@@ -34,7 +34,7 @@ jobs:
     - name: Set up Python
       uses: actions/setup-python@v5
       with:
-        python-version: 3.10.12
+        python-version: 3.11
     - name: Install Pandoc, repo and dependencies
       run: |
         sudo apt install pandoc

.github/workflows/python-ci.yml

@@ -30,7 +30,7 @@ jobs:
     strategy:
       max-parallel: 4
       matrix:
-        python-version: ['3.10', '3.11', '3.12']
+        python-version: ['3.11', '3.12']
         os: [ubuntu-latest, macos-latest, windows-latest]
 
     runs-on: ${{ matrix.os }}

.github/workflows/python-package.yml

@@ -18,7 +18,7 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: ['3.10', '3.11','3.12']
+        python-version: ['3.11','3.12']
     if: "!contains(github.event.head_commit.message, '[ci skip]')"
 
     steps:

CONTRIBUTING.rst

@@ -102,7 +102,7 @@ Before you submit a pull request, check that it meets these guidelines:
 2. If the pull request adds functionality, the docs should be updated. Put
    your new functionality into a function with a docstring, and add the
    feature to the list in README.md.
-3. The pull request should work for Python, 3.10, 3.11 and 3.12, and for PyPy. Check
+3. The pull request should work for Python, 3.11 and 3.12, and for PyPy. Check
    https://travis-ci.com/easyScience/EasyReflectometryLib/pull_requests
    and make sure that the tests pass for all supported Python versions.
 

pyproject.toml

@@ -21,41 +21,40 @@ classifiers = [
     "Topic :: Scientific/Engineering",
     "Programming Language :: Python :: 3",
     "Programming Language :: Python :: 3 :: Only",
-    "Programming Language :: Python :: 3.10",
     "Programming Language :: Python :: 3.11",
     "Programming Language :: Python :: 3.12",
     "Development Status :: 3 - Alpha"
 ]
 
-requires-python = ">=3.10,<3.13"
+requires-python = ">=3.11,<3.13"
 
 dependencies = [
-    "easyscience==1.3.0",
-    "scipp==25.2.0",
-    "refnx==0.1.52",
+    "easyscience",
+    "scipp",
+    "refnx",
     "refl1d[webview]==1.0.0a12",
-    "orsopy==1.2.1",
-    "xhtml2pdf==0.2.17",
-    "bumps==1.0.0b7",
+    "orsopy",
+    "xhtml2pdf",
+    "bumps",
 ]
 
 [project.optional-dependencies]
 dev = [
-    "build==1.2.2.post1",
-    "codecov==2.1.13",
-    "coverage==7.7.0",
-    "coveralls==4.0.1",
-    "flake8==7.1.2",
-    "ipykernel==6.29.5",
-    "jupyter==1.1.1",
-    "jupyterlab==4.3.6",
-    "plopp==25.3.0",
-    "pooch==1.8.2",
-    "pytest==8.3.5",
-    "pytest-cov==6.0.0",
-    "ruff==0.11.0",
-    "toml==0.10.2",
-    "yapf==0.43.0",
+    "build",
+    "codecov",
+    "coverage",
+    "coveralls",
+    "flake8",
+    "ipykernel",
+    "jupyter",
+    "jupyterlab",
+    "plopp",
+    "pooch",
+    "pytest",
+    "pytest-cov",
+    "ruff",
+    "toml",
+    "yapf",
 ]
 
 docs = [
@@ -134,10 +133,9 @@ force-single-line = true
 legacy_tox_ini = """
 [tox]
 isolated_build = True
-envlist = py{3.10,3.11,3.12}
+envlist = py{3.11,3.12}
 [gh-actions]
 python =
-        3.10: py310
         3.11: py311
         3.12: py312
 [gh-actions:env]

src/easyreflectometry/calculators/bornagain/calculator.py

@@ -1,6 +1,6 @@
 __author__ = 'github.com/arm61'
 
-from easyscience.Objects.Inferface import ItemContainer
+from easyscience.fitting.calculators.interface_factory import ItemContainer
 
 from easyreflectometry.model import Model
 from easyreflectometry.sample import Layer

src/easyreflectometry/calculators/calculator_base.py

@@ -4,8 +4,8 @@
 from typing import Callable
 
 import numpy as np
-from easyscience.Objects.core import ComponentSerializer
-from easyscience.Objects.Inferface import ItemContainer
+from easyscience.fitting.calculators.interface_factory import ItemContainer
+from easyscience.io import SerializerComponent
 
 from easyreflectometry.model import Model
 from easyreflectometry.sample import BaseAssembly
@@ -17,7 +17,7 @@
 from .wrapper_base import WrapperBase
 
 
-class CalculatorBase(ComponentSerializer, metaclass=ABCMeta):
+class CalculatorBase(SerializerComponent, metaclass=ABCMeta):
     """
     This class is a template and defines all properties that a calculator should have.
     """

src/easyreflectometry/calculators/factory.py

@@ -1,7 +1,7 @@
 __author__ = 'github.com/wardsimon'
 from typing import Callable
 
-from easyscience.Objects.Inferface import InterfaceFactoryTemplate
+from easyscience.fitting.calculators.interface_factory import InterfaceFactoryTemplate
 
 from easyreflectometry.calculators import CalculatorBase
 

src/easyreflectometry/calculators/refl1d/wrapper.py

@@ -42,9 +42,7 @@ def create_item(self, name: str):
 
         :param name: The name of the item
         """
-        self.storage['item'][name] = Repeat(
-            names.Stack(names.Slab(names.SLD(), thickness=0, interface=0)), name=str(name)
-        )
+        self.storage['item'][name] = Repeat(names.Stack(names.Slab(names.SLD(), thickness=0, interface=0)), name=str(name))
         del self.storage['item'][name].stack[0]
 
     def update_layer(self, name: str, **kwargs):
@@ -66,7 +64,9 @@ def get_layer_value(self, name: str, key: str) -> float:
         :param key: The given value keys
         """
         if key in ['magnetism_rhoM', 'magnetism_thetaM']:
-            return getattr(self.storage['layer'][name].magnetism, key.split('_')[-1]).value #TODO: check if we want to return the raw value or the full Parameter  # noqa: E501
+            return getattr(
+                self.storage['layer'][name].magnetism, key.split('_')[-1]
+            ).value  # TODO: check if we want to return the raw value or the full Parameter  # noqa: E501
         return super().get_layer_value(name, key)
 
     def create_model(self, name: str):

src/easyreflectometry/data/__init__.py

@@ -5,9 +5,9 @@
 from .measurement import merge_datagroups
 
 __all__ = [
-    "load",
-    "load_as_dataset",
-    "merge_datagroups",
-    "ProjectData",
-    "DataSet1D",
+    'load',
+    'load_as_dataset',
+    'merge_datagroups',
+    'ProjectData',
+    'DataSet1D',
 ]