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lines changed Original file line number Diff line number Diff line change @@ -15,12 +15,11 @@ before_install:
1515install :
1616 - pip install flake8 planemo
1717 - planemo conda_init
18- - export PATH="$PLANEMO_CONDA_PREFIX/bin:$PATH"
19- - conda update -y conda
20- - conda create -y -q -c bioconda --name iuc_conda samtools=0.1.19 bcftools
21- - . activate iuc_conda
18+ - $PLANEMO_CONDA_PREFIX/bin/conda update -y conda
19+ - $PLANEMO_CONDA_PREFIX/bin/conda create -y -q -c bioconda --name iuc_conda samtools=0.1.19 bcftools
20+ - . $PLANEMO_CONDA_PREFIX/bin/activate iuc_conda
2221 - planemo --version
23- - conda --version
22+ - $PLANEMO_CONDA_PREFIX/bin/ conda --version
2423 - git diff --quiet "$TRAVIS_COMMIT_RANGE" -- ; GIT_DIFF_EXIT_CODE=$?
2524 - |
2625 if [ "$GIT_DIFF_EXIT_CODE" -gt 1 ] ; then
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