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Commit 8d7af51

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heracleheracle
committed
rebase
Signed-off-by: Radu Muntean <[email protected]>
1 parent 3b088fa commit 8d7af51

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‎.gitignore‎

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*.fai
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!metagraph/tests/data/*.fa
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!metagraph/tests/data/*.fai
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!metagraph/tests/data/taxonomic_data/*.fa
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metagraph/tests/data/*dump_test*
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projects/*/temp
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visualization/geolocation/data/*

‎metagraph/tests/data/taxonomic_data/dumb.accession2taxid‎

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accession accession.version taxid gi
2+
NC_01 NC_01.1 10001 10001
3+
NC_02 NC_02.1 10002 10002
4+
NC_03 NC_04.1 10003 10003
5+
NC_04 NC_04.1 10004 10004
6+
NC_05 NC_05.1 10005 10005
7+
NC_06 NC_06.1 10006 10006
8+
NC_07 NC_07.1 10007 10007
9+
NC_08 NC_08.1 10008 10008
10+
NC_09 NC_09.1 10009 10009
11+
NC_10 NC_10.1 10010 10010
12+
NC_11 NC_11.1 10011 10011
13+
NC_12 NC_12.1 10012 10012
14+
NC_13 NC_13.1 10013 10013
15+
NC_14 NC_14.1 10014 10014
16+
NC_15 NC_15.1 10015 10015
17+
NC_16 NC_16.1 10016 10016
18+
NC_17 NC_17.1 10017 10017
19+
NC_18 NC_18.1 10018 10018
20+
NC_19 NC_19.1 10019 10019
21+
NC_20 NC_20.1 10020 10020

‎metagraph/tests/data/taxonomic_data/dumb_nodes.dmp‎

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10001 | 10001
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10002 | 10001
3+
10003 | 10001
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10004 | 10002
5+
10005 | 10002
6+
10006 | 10002
7+
10007 | 10003
8+
10008 | 10003
9+
10009 | 10004
10+
10010 | 10004
11+
10011 | 10004
12+
10012 | 10005
13+
10013 | 10005
14+
10014 | 10006
15+
10015 | 10006
16+
10016 | 10007
17+
10017 | 10007
18+
10018 | 10007
19+
10019 | 10008
20+
10020 | 10008

‎metagraph/tests/data/taxonomic_data/full_hierarchy_sequences.fa‎

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>gi|10001|ref|NC_01.1| Test sample 1 (root)
2+
CGCCGGCCTCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGGGGCTATTCGAG
3+
AGGGATCAATGGGTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTGGTGT
4+
CTATCTCGCATTCAATGCAGATTACTCCGATGAGCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
5+
CATCTTGGCATGACTGTCACTTCGGCAGTAGCAGACAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
6+
TTGAAAAGTTGTAACAAAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCACTACTTAGCAAAT
7+
TAAATCGAGTGTTAGCCGCATGTAGACATTTAATGAGTTGGTATTCTTGTAGTAGGGTCATCGTAGCCAA
8+
TATGACTTAAACGAGGGGGCTGGGGCTGTTCGCAGACAAATCTACGCCTACTACAAACTCTAGCAATACC
9+
>gi|10002|ref|NC_02.1| Test sample 2 (dist to root = 1)
10+
CGCCGGCCTCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGCGGCTATTCGAG
11+
AGGGATCTATGGGTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTGGTGT
12+
CTATCTCGCATTCAATGCAGATTACTCCGATGAGCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
13+
CATCTTGGCATGACTGTCACTTCGGCAGTAGCAGAAAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
14+
TTGAAAAGTTGTAACAAAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCACTACTAAGCAAAT
15+
TAAATCGAGTGTTAGCCGCATGTAGACATTTAATGAGTTGGTATTCTTGTAGTAGGGTCATCGTAGCCAA
16+
TATGACTTAAACCAGGGGGCTGGGGCTGTTCGCAGACAAATCTACGCCTACTACAAACTCTAGCAATACC
17+
>gi|10003|ref|NC_03.1| Test sample 3 (dist to root = 1)
18+
CGCCGGCCCCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGGGGCTATTCGAG
19+
AGGGATCAATGGGTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTGGTTT
20+
CTATCTCGCATCCAATGCAGATTACTCCGATGAGCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
21+
CATCTTGGCATGACTGTCACTTCGGCAGTAGCAGACAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
22+
TTGAAAAGTTGTAACAAAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCACTACTTAGCAAAT
23+
TAAATCGAGTGTTAGCCGCATGTAGACATTTAATGAGTTGGTATTCTTGTAGTAGGGTCATCGTAGCAAA
24+
TATGACTTAAACGGGGGGGCTGGGGCTGTTCGCAGACAAATCTACGCCTACTACAAACTCTAGCAATACC
25+
>gi|10004|ref|NC_04.1| Test sample 4 (dist to root = 2)
26+
CGCCGGCCTCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGCGGCTATTCGAG
27+
AGGGATCTATGGGTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTTGTGT
28+
CTATCTCGCATTCAATGCAGATTACTCCGATGAGCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
29+
CATCTTGGCATGACTGTCACTTCGGCAGTAGCAGAAAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
30+
TTGAAAAGTTGTAACAAAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCATTACTAAGCAAAT
31+
TAAATCGAGTGTTAGCCGCATGTAGACATTTAATGAGTTGGTATTCTTGTAGTAGGGTCATCGTAGCCAA
32+
TATGACTTAACCCAGGGGGCTGGGGCTGTTCGCAGACAAATCTACGCCTACTACAAACTCTAGAAATACC
33+
>gi|10005|ref|NC_05.1| Test sample 5 (dist to root = 2)
34+
CGCCGGCCTCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGCGGCTATTCGAG
35+
AGGGATCTATGGGTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTGGTGT
36+
CTATCTCGCATTCAATGCAGATTACTCCGATGAGCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
37+
CATCTTGGCATGACTGTCTCTTCGGCAGTAGCAGAAAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
38+
TTGAAAAGTTGTAACAAAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCACTACTAAGCAAAT
39+
TAAATCTAGTGTTAGCCGCATGTAGACATTTAATGAGTTGGTATTCTTGTAGTAGGGTCATCGTAGCCAA
40+
TATGACTTAAACCAGGGGGCTGTGGCTGTTCGCAGACAAATCTACGCCTACTACAAACTCTAGCAATACC
41+
>gi|10006|ref|NC_06.1| Test sample 6 (dist to root = 2)
42+
CGCCGGCCTCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGCGGCTATTCGAG
43+
AGGGATCTATGGGTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTGGTGT
44+
CTATCTCGCATTCAATGCAGATTACTCCGATGGGCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
45+
CATCTTGGCATGACTGTCACTTCGGCAGTAGCAGAAAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
46+
TTGAAAAGTTGTAACATAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCACTACTAAGCAAAT
47+
TAAATCGAGTGTTAGCCGCATGTAGACATTTAATGGGTTGGTATTCTTGTAGTAGGGTCATCGTAGCCAA
48+
TATGACTTAAACCAGGTGGCTGGGGCTGTTCGCAGACAAATCTACGCCTACTACAAACTCTAGCAATACC
49+
>gi|10007|ref|NC_07.1| Test sample 7 (dist to root = 2)
50+
CGCCGGCCCCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGGGGCCATTCGAG
51+
AGGGATCAATGGGTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTGGTTT
52+
CTATCTCGCATCCAATGCAGATTACTCCGATGAGCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
53+
CATCTTGGCATGACTGTCACTTCGGCAGTAGCAGACAAGTTTGAATTGGGCGAAACATACTTGCTTCCTC
54+
TTGAAAAGTTGTAACAAAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCACTACTTAGCAAAT
55+
TAAATCGAGTGTTAGCCGCATGTAGACATTTAATGAGTTGGTATTCTTGTAGTAGGGTCACCGTAGCAAA
56+
TATGACTTAAACGGGGGGGCTGGGGCTGTTCGCAGACAAATCTACGCCTACTACAAACTCTAGCCATACC
57+
>gi|10008|ref|NC_08.1| Test sample 8 (dist to root = 2)
58+
CGCCGGCCCCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGGGGCTATTCGAG
59+
AGGGATCAATGGGTCAGATCACGGCCGTAGCTAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTGGTTT
60+
CTATCTCGCATCCAATGCAGATTACTCCGATGATCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
61+
CATCTTGGCATGACTGTCACTTCGGCAGTAGCAGACAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
62+
TTGAAAAGTTGTAACAAAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCACTACTTAGCAAAT
63+
TAAATCGAGTGTTAGCCGCATGTAGACATTTTATGAGTTGGTATTCTTGTAGTAGGGTCATCGTAGCAAA
64+
TATGACTTAAACGGGGGGGCTGGGGCTGTTCGGAGACAAATCTACGCCTACTACAAACTCTAGCAATACC
65+
>gi|10009|ref|NC_09.1| Test sample 9 (dist to root = 3)
66+
CGCCGGCCTCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGCGGCTATTCGAG
67+
AGGGATCTATGGTTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTTGTGT
68+
CTATCTCGCATTCAATGCAGATTACTCCGATGAGCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
69+
CATCTTGGCATGACTGTCACTTCGGCAGTAGCAGGAAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
70+
TTGAAAAGTTGTAACAAAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCATTACTAAGCAAAT
71+
TAAATCGAGTGTTAGCCGCATGTAGACATTTAATGAGTTGGTATTCTTGTAGTAGGGTCATCGTAGCCAA
72+
TATGACTTAACCAAGGGGGCTGGGGCTGTTCGCAGGCAAATCTACGCCTACTACAAACTCTAGAAATACC
73+
>gi|10010|ref|NC_10.1| Test sample 10 (dist to root = 3)
74+
CGCCGGCCTCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGCGGTTATTCGAG
75+
AGGGATCTATGGGTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTTGTGT
76+
CTATCTCGCATTCAATGCAGATTACTCCGATGAGCGACACAAAGAGTGGGCTAAGTACACGCCCTCAATG
77+
CATCTTGGCATGACTGTCACTTCGGCAGTAGCAGAAAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
78+
TTGAAAAGTTGTAACCAAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCATTACTAAGCAAAT
79+
TAAATCGAGTGTTAGCCGCATGTAGACATTTAATGAGTTGGTATTCTTGTAGTAGGGTCATCTTAGCCAA
80+
TATGACTTAACCCAAGGGGCTGGGGCTGTTCGCAGACAAATCTACGCCTACTACAAACTCTAGAAATACC
81+
>gi|10011|ref|NC_11.1| Test sample 11 (dist to root = 3)
82+
CGCCGGCCTCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGCGGCTATTCGAG
83+
GGGGATCTATGGGTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTTGTGT
84+
CTATCTCGCATTCATTGCAGATTACTCCGATGAGCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
85+
CATCTTGGCATGACTGTCACTTCGGCAGTAGCAGAAAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
86+
TTGAAAAGTTGTAACAAAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCATTACTAAGCAAAT
87+
TAAATCGAGTGTTGGCCGCATGTAGACATTTAATGAGTTGGTATTCTTGTAGTAGGGTCATCGTAGCCAA
88+
TTTGACTTAACCCAGGGGGCTGGGGCTGTTCGCAGACAAATCTACGCCTACTACAAACTCTAGAAATACC
89+
>gi|10012|ref|NC_12.1| Test sample 12 (dist to root = 3)
90+
CGGCGGCCTCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGCGGCTATTCGAG
91+
AGGGATCTATGGGTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAGAGGGTGACTCTGGTGT
92+
CTATCTCGCATTAAATGCAGATTACTCCGATGAGCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
93+
CATCTTGGCATGACTGTCTCTTCCGCAGTAGCAGAAAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
94+
TTGAAAAGTTGTAACAAAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCACTACTAAGCAAAT
95+
TAAATCTAGTGTTAGCCGCATGTAGACATTTAATGAGTTGGTATTCTTGTAGTAGGGTCATCGTAGCCAA
96+
TATGACTTAAACCAGGGGGCTGTGGCTGTTCGCAGACAAATCTACGCCTACTACAAACTCTAGCAATACC
97+
>gi|10013|ref|NC_13.1| Test sample 13 (dist to root = 3)
98+
CGCCGGCCTCCCCAAAAAATCCCCGGAGGAATATTTCGACCAAACAATGCACTTCCGGCGGCTATTCGAG
99+
AGGGATCTATGGGTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTGGTGT
100+
CAATCTCGCATTCAATGCAGATTACTCCGATGAGCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
101+
CATCTTGGCATGACTGTCTCTTCGGCAGTAGCAGAAAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
102+
TTGAAAAGTTGTAACAAAACGTAACAACTCACGCGACAGTAGCCTTTGGGACTTTCACTACTAAGCAAAT
103+
TAAATCTAGTGTTAGCCGCATGTAGACATTTAATGAGTTGGTATTCTTGTAGTAGGGTCATCGTAGCCAA
104+
TATGACTTAAACCAGGGGGCTGTGGCTGTTCGCAGACCAATCTACGCCTACTACAAACTCTAGCAATACC
105+
>gi|10014|ref|NC_14.1| Test sample 14 (dist to root = 3)
106+
CGCCGGCCTCCCCAAAAAATCCCCGGGGGAATATTTCGACCACACAATGCACTTCCGGCGGCTATTCGAG
107+
AGGGATCTATGGGTCGGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTGGTGT
108+
CTATCTCGCATTCAATGCAGATTACTCCGATGGGCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
109+
CATCTTGGCATGACTGTCACTTCGGCAGTAGCAGAGAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
110+
TTGATAAGTTGTAACATAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCACTACTAAGCAAAT
111+
TAAATCGAGTGTTAGCCGCATGTAGACATTTAATGGGTTGGTATTCTTGTAGTAGGGTCATCGTAGCCAA
112+
TATGACTTAAACCAGGTGGCTGGGGCTGTTCGCAGACAAATCTACGGCTACTACAAACTCTAGCAATACC
113+
>gi|10015|ref|NC_15.1| Test sample 15 (dist to root = 3)
114+
CGCCGGCCTCCCCAAAAAATCCCCGGGGGAAAATTTCGACCAAACAATGCACTTCCGGCGGCTATTCGAG
115+
AGGGATCTATGGGTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAATGGGTGACTCTGGTGT
116+
CTATCTCGCATTCAATGCAGATTACTCCGATGGGCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
117+
CATCTTGGCATGACTGTCACTTCGGCAGTAGCAGAAAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
118+
TTGAAAAGTTGTAACATAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCACTACTAAGCAAAT
119+
TAAATCGAGTGTTAGCCGCATGTAGAAATTTAATGGGTTGGTATTCTTGTAGTATGGTCATCGTAGCCAA
120+
TATGACTTAAACCAGGTGGCTGGCGCTGTTCGCAGACAAATCTACGCCTACTACAAACTCTAGCAATACC
121+
>gi|10016|ref|NC_16.1| Test sample 16 (dist to root = 3)
122+
CGCCGGCCCCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGGGGCCTTTCGAG
123+
AGGGATCAATGGGTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTGGTTT
124+
CTATCTCGCATCCAATGCAGATTACTCCGATGAGCGAAACAAAGAGTGGGCTAAGTACACGCACTCAATG
125+
CATCTTGGCATGACTGTCACTTCGGCAGTAGCAGACAAGTTTGAATTGGGCGAAACATACTTGCTTCCTC
126+
TTGAAAAGTTGTAACAAAACGTACCAACTCACGCGACGGTAGCCTTTGGGACTTTCACTACTTAGCAAAT
127+
TAAATCGAGTGTTGGCCGCATGTAGACATTTAATGAGTTGGTATTCTTGTAGTAGGGTCACCGTAGCAAA
128+
TATGACTTAAACGTGGGGGCTGGGGCTGTTCGCAGACAAATCTACGCCTACTACAAACTCTAGCCATACC
129+
>gi|10017|ref|NC_17.1| Test sample 17 (dist to root = 3)
130+
CGCCGGCCCCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGGGGCCATTCGAG
131+
AGGGATCAATGGGTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTGGTTT
132+
CTATCTCGCATCCCATGCAGATTACTCCGATGAGCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
133+
CATCTTGGCATAACTGTCACTTCGGCAGTAGCAGACAAGTTTGAATTGGGCGAAACATACTTGCTTCCTC
134+
TTGAAAAATTGTAACAAAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCACTACTTAGCAAAT
135+
TAAATCGAGTGTTAGCCGAATGTAGACATTTAATGAGTTGGTATTCTTGTAGTAGGGTCACCGTAGCAAA
136+
TATGACTTAAACGGGGGGGCTCGGGCTGTTCGCAGACAAATCTACGCCTACTACAAACTCTAGCCATACC
137+
>gi|10018|ref|NC_18.1| Test sample 18 (dist to root = 3)
138+
CGCCGGCCCCCCCAAAAAATCCCCGGGGGAATATTTCGACCACACAATGCACTTCCGGGGGCCATTCGAG
139+
AGGGATCAATGGGTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTGGTTT
140+
CTATCTCGCATCCAATGCAGATTACTCCGATGATCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
141+
CATCTTGGCATGACTGTCACTTCGGCAGTAGCAGACAAGTTTGAATTGGGCGAAACATACTTGCTTCCTC
142+
TTGAAAAGTTGTAACAAAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCACTACTTGGCAAAT
143+
TAAATCGAGTGTTAGCCGCATCTAGACATTTAATGAGTTGGTTTTCTTGTAGTAGGGTCACCGTAGCAAA
144+
TATGACTTAAACGGGGGGGCTGGGGCTGTTCGCAGACAAATCTACGCCTACTACAAACTCTAGCCATACC
145+
>gi|10019|ref|NC_19.1| Test sample 19 (dist to root = 3)
146+
CGCCGGCCGCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGGGGCTATTCGAG
147+
AGGGATCAATGGGTCAGATCACGGCCGTAGCTAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTGGTTT
148+
CTATCTCGCATCCAATGCCGATTACTCCGATGATCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
149+
CATCTTGGCATGACTGTCATTTCGGCAGTAGCAGACAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
150+
TTGAAAAGTTGTAACAAAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCACTACTTAGCAAAT
151+
TAAATCCAGTGTTAGCCGCATGTAGACATTTTATGAGTTGGTATTCTTGTAGTAGGGTCATCGTAGCAAA
152+
TATGACCTAAACGGGGGGGCTGGGGCTGTTCGGAGACAAATCTACGCCTACTACAAACTCTAGCAATACC
153+
>gi|10020|ref|NC_20.1| Test sample 20 (dist to root = 3)
154+
CGCCGGCCCCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGGGGCTATTCGAG
155+
AGGGATCAATGGGTCAGATCACGGCCGTAGCTAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTGGTTT
156+
CTATCTCGCATCCAATGCAGATTACTCCGATTATCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
157+
CATCTTGGCATGACTGTCACTTCGGCAGTAGCAGACAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
158+
TTGAAAAGTTGTAACAAAACGTACCAACTCACGCGACCGTAGCCTTTGGGACTTTCACTACTTAGCAAAT
159+
TAAATCGAGTGTTAGCCGCATGTAGACATTTTATGAGTTGGTACTCTTGTAGTAGGGTCATCGTAGCAAA
160+
TATGACTTAAACGGGGGGGCTGGGGCTGTTCGGAGACAAATCTACGCCTACTACCAACTCTAGCAATACC
161+

‎metagraph/tests/data/taxonomic_data/tax_input.fa‎

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>gi|10009|ref|NC_09.1| Test sample 9 (dist to root = 3)
2+
CGCCGGCCTCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGCGGCTATTCGAG
3+
AGGGATCTATGGTTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTTGTGT
4+
CTATCTCGCATTCAATGCAGATTACTCCGATGAGCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
5+
CATCTTGGCATGACTGTCACTTCGGCAGTAGCAGGAAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
6+
TTGAAAAGTTGTAACAAAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCATTACTAAGCAAAT
7+
TAAATCGAGTGTTAGCCGCATGTAGACATTTAATGAGTTGGTATTCTTGTAGTAGGGTCATCGTAGCCAA
8+
TATGACTTAACCAAGGGGGCTGGGGCTGTTCGCAGGCAAATCTACGCCTACTACAAACTCTAGAAATACC
9+
>gi|10010|ref|NC_10.1| Test sample 10 (dist to root = 3)
10+
CGCCGGCCTCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGCGGTTATTCGAG
11+
AGGGATCTATGGGTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTTGTGT
12+
CTATCTCGCATTCAATGCAGATTACTCCGATGAGCGACACAAAGAGTGGGCTAAGTACACGCCCTCAATG
13+
CATCTTGGCATGACTGTCACTTCGGCAGTAGCAGAAAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
14+
TTGAAAAGTTGTAACCAAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCATTACTAAGCAAAT
15+
TAAATCGAGTGTTAGCCGCATGTAGACATTTAATGAGTTGGTATTCTTGTAGTAGGGTCATCTTAGCCAA
16+
TATGACTTAACCCAAGGGGCTGGGGCTGTTCGCAGACAAATCTACGCCTACTACAAACTCTAGAAATACC
17+
>gi|10011|ref|NC_11.1| Test sample 11 (dist to root = 3)
18+
CGCCGGCCTCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGCGGCTATTCGAG
19+
GGGGATCTATGGGTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTTGTGT
20+
CTATCTCGCATTCATTGCAGATTACTCCGATGAGCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
21+
CATCTTGGCATGACTGTCACTTCGGCAGTAGCAGAAAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
22+
TTGAAAAGTTGTAACAAAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCATTACTAAGCAAAT
23+
TAAATCGAGTGTTGGCCGCATGTAGACATTTAATGAGTTGGTATTCTTGTAGTAGGGTCATCGTAGCCAA
24+
TTTGACTTAACCCAGGGGGCTGGGGCTGTTCGCAGACAAATCTACGCCTACTACAAACTCTAGAAATACC
25+
>gi|10012|ref|NC_12.1| Test sample 12 (dist to root = 3)
26+
CGGCGGCCTCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGCGGCTATTCGAG
27+
AGGGATCTATGGGTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAGAGGGTGACTCTGGTGT
28+
CTATCTCGCATTAAATGCAGATTACTCCGATGAGCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
29+
CATCTTGGCATGACTGTCTCTTCCGCAGTAGCAGAAAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
30+
TTGAAAAGTTGTAACAAAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCACTACTAAGCAAAT
31+
TAAATCTAGTGTTAGCCGCATGTAGACATTTAATGAGTTGGTATTCTTGTAGTAGGGTCATCGTAGCCAA
32+
TATGACTTAAACCAGGGGGCTGTGGCTGTTCGCAGACAAATCTACGCCTACTACAAACTCTAGCAATACC
33+
>gi|10013|ref|NC_13.1| Test sample 13 (dist to root = 3)
34+
CGCCGGCCTCCCCAAAAAATCCCCGGAGGAATATTTCGACCAAACAATGCACTTCCGGCGGCTATTCGAG
35+
AGGGATCTATGGGTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTGGTGT
36+
CAATCTCGCATTCAATGCAGATTACTCCGATGAGCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
37+
CATCTTGGCATGACTGTCTCTTCGGCAGTAGCAGAAAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
38+
TTGAAAAGTTGTAACAAAACGTAACAACTCACGCGACAGTAGCCTTTGGGACTTTCACTACTAAGCAAAT
39+
TAAATCTAGTGTTAGCCGCATGTAGACATTTAATGAGTTGGTATTCTTGTAGTAGGGTCATCGTAGCCAA
40+
TATGACTTAAACCAGGGGGCTGTGGCTGTTCGCAGACCAATCTACGCCTACTACAAACTCTAGCAATACC
41+
>gi|10014|ref|NC_14.1| Test sample 14 (dist to root = 3)
42+
CGCCGGCCTCCCCAAAAAATCCCCGGGGGAATATTTCGACCACACAATGCACTTCCGGCGGCTATTCGAG
43+
AGGGATCTATGGGTCGGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTGGTGT
44+
CTATCTCGCATTCAATGCAGATTACTCCGATGGGCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
45+
CATCTTGGCATGACTGTCACTTCGGCAGTAGCAGAGAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
46+
TTGATAAGTTGTAACATAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCACTACTAAGCAAAT
47+
TAAATCGAGTGTTAGCCGCATGTAGACATTTAATGGGTTGGTATTCTTGTAGTAGGGTCATCGTAGCCAA
48+
TATGACTTAAACCAGGTGGCTGGGGCTGTTCGCAGACAAATCTACGGCTACTACAAACTCTAGCAATACC
49+
>gi|10015|ref|NC_15.1| Test sample 15 (dist to root = 3)
50+
CGCCGGCCTCCCCAAAAAATCCCCGGGGGAAAATTTCGACCAAACAATGCACTTCCGGCGGCTATTCGAG
51+
AGGGATCTATGGGTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAATGGGTGACTCTGGTGT
52+
CTATCTCGCATTCAATGCAGATTACTCCGATGGGCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
53+
CATCTTGGCATGACTGTCACTTCGGCAGTAGCAGAAAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
54+
TTGAAAAGTTGTAACATAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCACTACTAAGCAAAT
55+
TAAATCGAGTGTTAGCCGCATGTAGAAATTTAATGGGTTGGTATTCTTGTAGTATGGTCATCGTAGCCAA
56+
TATGACTTAAACCAGGTGGCTGGCGCTGTTCGCAGACAAATCTACGCCTACTACAAACTCTAGCAATACC
57+
>gi|10016|ref|NC_16.1| Test sample 16 (dist to root = 3)
58+
CGCCGGCCCCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGGGGCCTTTCGAG
59+
AGGGATCAATGGGTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTGGTTT
60+
CTATCTCGCATCCAATGCAGATTACTCCGATGAGCGAAACAAAGAGTGGGCTAAGTACACGCACTCAATG
61+
CATCTTGGCATGACTGTCACTTCGGCAGTAGCAGACAAGTTTGAATTGGGCGAAACATACTTGCTTCCTC
62+
TTGAAAAGTTGTAACAAAACGTACCAACTCACGCGACGGTAGCCTTTGGGACTTTCACTACTTAGCAAAT
63+
TAAATCGAGTGTTGGCCGCATGTAGACATTTAATGAGTTGGTATTCTTGTAGTAGGGTCACCGTAGCAAA
64+
TATGACTTAAACGTGGGGGCTGGGGCTGTTCGCAGACAAATCTACGCCTACTACAAACTCTAGCCATACC
65+
>gi|10017|ref|NC_17.1| Test sample 17 (dist to root = 3)
66+
CGCCGGCCCCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGGGGCCATTCGAG
67+
AGGGATCAATGGGTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTGGTTT
68+
CTATCTCGCATCCCATGCAGATTACTCCGATGAGCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
69+
CATCTTGGCATAACTGTCACTTCGGCAGTAGCAGACAAGTTTGAATTGGGCGAAACATACTTGCTTCCTC
70+
TTGAAAAATTGTAACAAAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCACTACTTAGCAAAT
71+
TAAATCGAGTGTTAGCCGAATGTAGACATTTAATGAGTTGGTATTCTTGTAGTAGGGTCACCGTAGCAAA
72+
TATGACTTAAACGGGGGGGCTCGGGCTGTTCGCAGACAAATCTACGCCTACTACAAACTCTAGCCATACC
73+
>gi|10018|ref|NC_18.1| Test sample 18 (dist to root = 3)
74+
CGCCGGCCCCCCCAAAAAATCCCCGGGGGAATATTTCGACCACACAATGCACTTCCGGGGGCCATTCGAG
75+
AGGGATCAATGGGTCAGATCACGGCCGTAGCAAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTGGTTT
76+
CTATCTCGCATCCAATGCAGATTACTCCGATGATCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
77+
CATCTTGGCATGACTGTCACTTCGGCAGTAGCAGACAAGTTTGAATTGGGCGAAACATACTTGCTTCCTC
78+
TTGAAAAGTTGTAACAAAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCACTACTTGGCAAAT
79+
TAAATCGAGTGTTAGCCGCATCTAGACATTTAATGAGTTGGTTTTCTTGTAGTAGGGTCACCGTAGCAAA
80+
TATGACTTAAACGGGGGGGCTGGGGCTGTTCGCAGACAAATCTACGCCTACTACAAACTCTAGCCATACC
81+
>gi|10019|ref|NC_19.1| Test sample 19 (dist to root = 3)
82+
CGCCGGCCGCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGGGGCTATTCGAG
83+
AGGGATCAATGGGTCAGATCACGGCCGTAGCTAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTGGTTT
84+
CTATCTCGCATCCAATGCCGATTACTCCGATGATCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
85+
CATCTTGGCATGACTGTCATTTCGGCAGTAGCAGACAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
86+
TTGAAAAGTTGTAACAAAACGTACCAACTCACGCGACAGTAGCCTTTGGGACTTTCACTACTTAGCAAAT
87+
TAAATCCAGTGTTAGCCGCATGTAGACATTTTATGAGTTGGTATTCTTGTAGTAGGGTCATCGTAGCAAA
88+
TATGACCTAAACGGGGGGGCTGGGGCTGTTCGGAGACAAATCTACGCCTACTACAAACTCTAGCAATACC
89+
>gi|10020|ref|NC_20.1| Test sample 20 (dist to root = 3)
90+
CGCCGGCCCCCCCAAAAAATCCCCGGGGGAATATTTCGACCAAACAATGCACTTCCGGGGGCTATTCGAG
91+
AGGGATCAATGGGTCAGATCACGGCCGTAGCTAAGCTCAATCACTCAGAAGTAAAGGGTGACTCTGGTTT
92+
CTATCTCGCATCCAATGCAGATTACTCCGATTATCGAAACAAAGAGTGGGCTAAGTACACGCCCTCAATG
93+
CATCTTGGCATGACTGTCACTTCGGCAGTAGCAGACAAGTTTGAATTGGGCGAAACATACTTGCTTACTC
94+
TTGAAAAGTTGTAACAAAACGTACCAACTCACGCGACCGTAGCCTTTGGGACTTTCACTACTTAGCAAAT
95+
TAAATCGAGTGTTAGCCGCATGTAGACATTTTATGAGTTGGTACTCTTGTAGTAGGGTCATCGTAGCAAA
96+
TATGACTTAAACGGGGGGGCTGGGGCTGTTCGGAGACAAATCTACGCCTACTACCAACTCTAGCAATACC

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