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Tianyuan Liu edited this page Sep 8, 2025
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Welcome to the SQANTI3 wiki!
Wiki contents:
Wiki index
- Introduction to SQANTI3
- Dependencies and installation
- Version history
- Isoform classification: categories and subcategories
- Running SQANTI3 from the wrapper
- Running SQANTI3 quality control
- Understanding the output of SQANTI3 QC
- TUSCO quick start (SQANTI3 QC)
- TUSCO-novel (Novel Isoform Stress Test)
- IsoAnnotLite
- Running SQANTI3 filter
- Running SQANTI3 rescue
- Tutorial: running SQANTI3 on an example dataset
- Running SQANTI-reads
- Memory requirements to use parallelization