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MikolajKocikowski/README.md

Hi there!

I'm Mikołaj, I do computational biology and bioinformatics. Currently working on network biology approaches to cancer immunotherapy and building NGS analysis tools for pandemic preparedness. Always open to collaboration. Check out my personal website to find out more!

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  1. BarkingUpTree-ploscb BarkingUpTree-ploscb Public

    Barking Up the Right Tree: Immune Checkpoint Signatures of Human and Dog Cancers; doi.org/10.1101/2024.06.26.600825

  2. Quarto Quarto Public

    Snippets for Quarto - especially image display tweaks

    1

  3. seq2scfv-unofficial-updated seq2scfv-unofficial-updated Public

    Forked from ngs-ai-org/seq2scfv

    The original Seq2scFv Dockerfile no longer builds on modern systems; this repository provides a fixed version to run and extend the pipeline reliably.

    Python

  4. seq2scfv-fixes seq2scfv-fixes Public

    Workarounds and Docker build fixes for seq2scfv

    2

  5. XGDAG_Docker XGDAG_Docker Public

    Unofficial Docker setup for running XGDAG graph neural network tool

    Dockerfile

  6. SFGLab/Team1_Gene_Prioritization_GNN SFGLab/Team1_Gene_Prioritization_GNN Public

    Jupyter Notebook 2 2