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@csbg

Computational Systems Biology Group

The Fortelny Lab at the University of Salzburg

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  1. BioinformaticsPracticals1 BioinformaticsPracticals1 Public

    Student resources for UE Bioinformatische Übungen I

    CSS

  2. Hands-on-Biomedical-Data Hands-on-Biomedical-Data Public

    Practical exercises for the course "Hands-on Biomedical Data - Resources and Analysis Tools"

  3. ML_in_omics ML_in_omics Public

    Elective module for teaching AI/ML in omics analysis

Repositories

Showing 10 of 14 repositories
  • ML_in_omics Public

    Elective module for teaching AI/ML in omics analysis

    csbg/ML_in_omics’s past year of commit activity
    0 GPL-3.0 0 0 0 Updated Jan 12, 2026
  • DGTX_feeding_strategies_nistcho Public

    Analysis code for the NISTCHO bioprocess data and cNISTmAb critical quality attributes

    csbg/DGTX_feeding_strategies_nistcho’s past year of commit activity
    R 0 MIT 0 0 0 Updated Dec 22, 2025
  • SplineOmics Public

    Timeseries analysis of -omics data can be carried out by fitting spline curves to the data and using limma for hypothesis testing. The obtained hits can be clustered based on the spline shape and then used for an over-representation (ORA) analysis.The R package SplineOmics streamlines this whole process and generates reports.

    csbg/SplineOmics’s past year of commit activity
    R 7 0 0 0 Updated Dec 19, 2025
  • CultShift Public

    Follow up on TFCF

    csbg/CultShift’s past year of commit activity
    R 0 0 0 0 Updated Dec 3, 2025
  • Hands-on-Biomedical-Data Public

    Practical exercises for the course "Hands-on Biomedical Data - Resources and Analysis Tools"

    csbg/Hands-on-Biomedical-Data’s past year of commit activity
    0 0 0 0 Updated Nov 26, 2025
  • tfcf Public

    Systematic functional screening of chromatin factors identifies strong lineage and disease dependencies in normal and malignant haematopoiesis.

    csbg/tfcf’s past year of commit activity
    R 6 1 1 0 Updated Oct 16, 2025
  • fibroblast-perturb-seq-analysis Public

    Epigenetic regulators of fibrotic transformation in cardiac fibroblasts

    csbg/fibroblast-perturb-seq-analysis’s past year of commit activity
    Jupyter Notebook 2 MIT 0 0 0 Updated Sep 29, 2025
  • SplineOmics_html_reports Public

    Stores the HTML reports that are the output of the functions of the SplineOmics package, so that they can be linked in the documentation of the actual SplineOmics package, without placing those big files there.

    csbg/SplineOmics_html_reports’s past year of commit activity
    HTML 0 0 0 0 Updated Sep 5, 2025
  • BioinformaticsPracticals1 Public

    Student resources for UE Bioinformatische Übungen I

    csbg/BioinformaticsPracticals1’s past year of commit activity
    CSS 0 0 0 0 Updated Sep 2, 2025
  • imputeeval Public
    csbg/imputeeval’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jan 22, 2025
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