ecell
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-           transomics2cytoscape PublicGet and integrate the pathways to create a 3D transomics network visualization ecell/transomics2cytoscape’s past year of commit activity 
-           ECell_Dive Publicecell/ECell_Dive’s past year of commit activity 
-           ecell4_base PublicAn integrated software environment for multi-algorithm, multi-timescale, multi-spatial-representation simulation of various cellular phenomena ecell/ecell4_base’s past year of commit activity 
-           kosmogora Publicecell/kosmogora’s past year of commit activity 
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