Bioinformatics PhD student at UCSD researching genome skimming, eDNA, and metagenomics.
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genome_size_scripts
genome_size_scripts PublicParallelizable SLURM skimming pipeline for downsampling and genome size estimation with RESPECT.
Java 1
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ReSkmer
ReSkmer PublicForked from shahab-sarmashghi/Skmer
Fast and accurate tool for estimating genomic distances between genome-skims
Python
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skmer_slurm_pipeline
skmer_slurm_pipeline PublicParallelizable SLURM skimming pipeline for biological data analysis with Skmer and ReSkmer
Shell
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