BLA_SingleCells

Get BMTK from the Allen Institute's GitHub:

git clone https://github.com/alleninstitute/bmtk

and install

cd bmtk
python setup.py install

To run any of these projects, change directory to the project of interest:

cd GapJunction

Build the network:

python build_network.py

Run the network:

python run_network.py

Visualize:

python plot_output.py