Sample image files are in zip format due to the storage limit. They can be unzipped into the exactly the same folder to run the demo. Each program has the master demo file to run.
Program 1 was written for GNU Octave and Program 2 and 3 were written for MATLAB. For MATLAB codes, deep learning and image processing tool boxes were used.
This code includes:
- ConfocalGN (codes for confocal image creation), Serge Dmitrieff in 2016 in EMBL, (SergeDmi/ConfocalGN)
- triangle_th, Dr B. Panneton, June, 2010
- tiffread Copyright (C) 1999-2010 Francois Nedelec
- gausss3filter Copyright (C) Max W.K. Law
- Octave code (Copyright (C) 2006-2015 John W. Eaton), under GPL licence
- saveastiff, (Copyright (c) 2012, YoonOh Tak)
- randg (modified from GNU Octave)
- gamrnd (modified from GNU Octave)
- see tiffread.m ; octave_randg.m ; gamrnd_simpl.m for licencing information.
This code was developped by "Eli" Il-Hyung Lee, 2021, Montclair State University