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Mazurowski Lab

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  1. finetune-SAM finetune-SAM Public

    This is an official repo for fine-tuning SAM to customized medical images.

    Python 272 42

  2. segmentation-guided-diffusion segmentation-guided-diffusion Public

    [MICCAI 2024] Easy diffusion models (optionally with segmentation guidance) for medical images and beyond.

    Python 204 20

  3. segment-anything-medical-evaluation segment-anything-medical-evaluation Public

    Code for "Segment Anything Model for Medical Image Analysis: an Experimental Study" in Medical Image Analysis

    Python 168 18

  4. SegmentAnyBone SegmentAnyBone Public

    SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI

    Python 116 22

  5. mri_foundation mri_foundation Public

    Python 71 10

  6. SlicerSegmentWithSAM SlicerSegmentWithSAM Public

    3D Slicer extension for Segment Anything Model (SAM) developed by Meta

    Python 68 7

Repositories

Showing 10 of 39 repositories
  • ContourDiff Public

    Contour-Guided Diffusion Models for Unpaired Image-to-Image Translation

    mazurowski-lab/ContourDiff’s past year of commit activity
    Python 58 Apache-2.0 9 0 0 Updated Dec 8, 2025
  • SAMFailureMetrics Public

    [WACV 2026] Metrics for tree-likeness and textural contrast of objects for segmentation and other computer vision tasks.

    mazurowski-lab/SAMFailureMetrics’s past year of commit activity
    Python 8 Apache-2.0 0 0 0 Updated Nov 17, 2025
  • GuidedMorph Public
    mazurowski-lab/GuidedMorph’s past year of commit activity
    Python 7 2 1 0 Updated Nov 13, 2025
  • SLM-SAM2 Public

    This is the official implementation of SLM-SAM 2

    mazurowski-lab/SLM-SAM2’s past year of commit activity
    Python 19 GPL-3.0 6 0 0 Updated Oct 29, 2025
  • PulmonaryEmbolismSegmentation Public

    Software asset for "Rethinking Pulmonary Embolism Segmentation: A Study of Current Approaches and Challenges with an Open Weight Model"

    mazurowski-lab/PulmonaryEmbolismSegmentation’s past year of commit activity
    Shell 4 0 0 0 Updated Oct 6, 2025
  • mazurowski-lab/mri_foundation’s past year of commit activity
    Python 71 10 3 0 Updated Sep 16, 2025
  • SlicerSegmentHumanBody Public

    3D Slicer extension for SegmentAnyBone developed by Mazurowski Lab

    mazurowski-lab/SlicerSegmentHumanBody’s past year of commit activity
    Python 14 5 0 0 Updated Aug 23, 2025
  • Foundation-based-reg Public

    This is an official repo for the paper of "Are Vision Foundation Models Ready for Out-of-the-Box Medical Image Registration?"

    mazurowski-lab/Foundation-based-reg’s past year of commit activity
    Python 33 Apache-2.0 10 2 0 Updated Aug 14, 2025
  • mazurowski-lab/CT-Muscle-and-Fat-Segmentation’s past year of commit activity
    Python 37 8 0 0 Updated Aug 7, 2025
  • BreastSegNet Public
    mazurowski-lab/BreastSegNet’s past year of commit activity
    0 0 0 0 Updated Jul 24, 2025