Repositories list

• status.bioconductor.org

  Public

  Bioconductor/status.bioconductor.org’s past year of commit activity
  Status page for Bioconductor based on cstate hugo site

  2•0•0•0•Updated Jan 7, 2026Jan 7, 2026

• BiocPkgDash

  Public
  R

  •0•0•0•0•Updated Jan 6, 2026Jan 6, 2026

• Biostrings

  Public
  Efficient manipulation of biological strings

  bioconductor-packagecore-package

  R

  •17•65•18•2•Updated Jan 6, 2026Jan 6, 2026

• BiocWorkingGroups

  Public
  Bioconductor working group guidelines. Also, a list of active, suggested, and inactive working groups for bioconductor for the community to volunteer to be apart of. The community is also welcome to suggest new working groups.

  communitybookworking-group+ 2bioconductorguidelines

  TeX

  •12•9•0•1•Updated Jan 5, 2026Jan 5, 2026

• bioconductor_docker

  Public
  Docker Containers for Bioconductor

  docker-imagebioconductorbioconductor-containers

  Dockerfile

  •

  Artistic License 2.0

  •32•88•14•3•Updated Jan 5, 2026Jan 5, 2026

• bioconductor-training

  Public
  Bioconductor teaching and education committee

  trainingeducationteaching+ 2bioconductorcommittee

  HTML

  •26•53•6•0•Updated Jan 4, 2026Jan 4, 2026

• BiocCheck

  Public

  Bioconductor/BiocCheck’s past year of commit activity
  core-servicesbioconductor-package

  R

  •30•9•7•0•Updated Dec 29, 2025Dec 29, 2025

• biocUniTools

  Public
  R

  •0•0•0•0•Updated Dec 25, 2025Dec 25, 2025

• BiocStickers

  Public
  Stickers for some Bioconductor packages - feel free to contribute and/or modify.

  bioconductorstickers

  R

  •

  Other

  •114•136•8•0•Updated Dec 24, 2025Dec 24, 2025

• EuroBioC2026

  Public
  Conference website for EuroBioc2026

  R

  •4•1•1•0•Updated Dec 22, 2025Dec 22, 2025

• VariantAnnotation

  Public
  Annotation of Genetic Variants

  bioconductor-packagecore-package

  R

  •20•30•33•1•Updated Dec 17, 2025Dec 17, 2025

• AnVILVRS

  Public
  u24hg010263

  R

  •0•0•0•0•Updated Dec 17, 2025Dec 17, 2025

• BioC2026

  Public
  conference website for Bioconductor 2026

  CSS

  •

  MIT License

  •1•0•0•1•Updated Dec 17, 2025Dec 17, 2025

• EuroBioC2025

  Public
  Website of the European Bioconductor Conference 2025

  conferencebioconductoreuropean

  HTML

  •3•3•4•0•Updated Dec 16, 2025Dec 16, 2025

• SparseArray

  Public
  High-performance sparse data representation and manipulation in R

  bioconductor-packagecore-packageu24ca289073

  C

  •3•10•2•0•Updated Dec 16, 2025Dec 16, 2025

• biocblog

  Public
  A Quarto blog for Bioconductor community

  blogcommunityr+ 4bioconductorhacktoberfestquartohacktoberfest2022

  HTML

  •41•17•5•0•Updated Dec 13, 2025Dec 13, 2025

• AnVIL

  Public
  Interact with AnVIL and Leonardo projects

  u24hg010263

  R

  •9•8•12•0•Updated Dec 11, 2025Dec 11, 2025

• bioconductor.org

  Public
  Source code for the Bioconductor website

  websitebioconductor

  HTML

  •44•32•16•11•Updated Dec 11, 2025Dec 11, 2025

• support.bioconductor.org

  Public
  support site code base. Based on Biostars.

  Python

  •

  MIT License

  •2•2•18•1•Updated Dec 10, 2025Dec 10, 2025

• UCSC.utils

  Public
  Low-level utilities to retrieve data from the UCSC Genome Browser

  bioconductor-packagecore-package

  R

  •0•1•0•0•Updated Dec 9, 2025Dec 9, 2025

• txdbmaker

  Public
  A set of tools for making TxDb objects from genomic annotations from various sources (e.g. UCSC, Ensembl, and GFF files)

  bioconductor-packagecore-package

  R

  •2•4•7•0•Updated Dec 9, 2025Dec 9, 2025

• GenomicRanges

  Public
  Representation and manipulation of genomic intervals

  bioconductor-packagecore-packagegenomicranges

  R

  •19•46•30•3•Updated Dec 8, 2025Dec 8, 2025

• download_stats

  Public
  Scripts used for generating the package download stats found at https://bioconductor.org/packages/oldstats/

  Python

  •1•0•0•0•Updated Dec 5, 2025Dec 5, 2025

• biocViews

  Public
  Categorized views of R package repositories

  bioconductor-packagecore-package

  R

  •4•4•5•5•Updated Dec 5, 2025Dec 5, 2025

• BiocAddins

  Public
  RStudio Addins from Bioconductor

  R

  •1•2•0•0•Updated Dec 5, 2025Dec 5, 2025

• GenomeInfoDb

  Public
  Utilities for manipulating chromosome names, including modifying them to follow a particular naming style

  bioconductor-packagecore-package

  R

  •13•33•5•0•Updated Dec 4, 2025Dec 4, 2025

• graph

  Public
  graph: A package to handle graph data structures

  bioconductor-packagecore-package

  R

  •10•6•4•1•Updated Dec 2, 2025Dec 2, 2025

• S4Arrays

  Public
  Foundation of array-like containers in Bioconductor

  bioconductor-packagecore-packageu24ca289073

  R

  •3•7•1•0•Updated Dec 1, 2025Dec 1, 2025

• BSgenomeForge

  Public
  Forge your own BSgenome data package

  bioconductor-packagecore-package

  R

  •3•5•5•0•Updated Dec 1, 2025Dec 1, 2025

• BBS

  Public
  The Bioconductor Build System

  Shell

  •13•11•59•3•Updated Nov 25, 2025Nov 25, 2025