Repositories list

• panpipes

  Public
  Multi-modal single cell analysis pipelines

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •14•62•31•5•Updated Dec 11, 2025Dec 11, 2025

• LEGACY1_2025

  Public
  LEGACY1 Manuscript 2025

  Jupyter Notebook

  •0•0•0•0•Updated Sep 17, 2025Sep 17, 2025

• LymphNodeCultureSlice_2025CellRep

  Public
  R

  •0•0•0•0•Updated May 12, 2025May 12, 2025

• panpipes-tutorials

  Public
  tutorials to run panpipes

  BSD 3-Clause "New" or "Revised" License

  •3•5•1•2•Updated Mar 18, 2025Mar 18, 2025

• TAURUS_paper

  Public
  Code for the TAURUS study

  R

  •6•11•0•0•Updated Oct 24, 2024Oct 24, 2024

• panpipes-benchmarks

  Public
  code used to run panpipes benchmarks

  R

  •

  BSD 3-Clause "New" or "Revised" License

  •1•1•0•0•Updated Sep 1, 2023Sep 1, 2023

• Photizo

  Public
  Spectroscopy analysis package

  HTML

  •1•7•0•0•Updated Apr 22, 2022Apr 22, 2022

• sc_pipelines_PSC

  Public
  Python

  •0•2•0•0•Updated Oct 11, 2021Oct 11, 2021