A library to read, manipulate and write various genetic sequencing formats.
Genereader provides a universal interface for reading, manipulating and writing various genetic sequencing formats for use in Plasmid Designer and similar bioinformatics applications.
Intended use-case
- Read genetic sequences and associated metadata from a file
- Manipulate the contents of the file using a high-level interface
- Write the modified data back to disk
| Format | Read | Write |
|---|---|---|
| FASTA | ✅ | TODO |
| FASTQ | ✅ | TODO |
| GB (GenBank) | ✅ | TODO |
| SAM | TODO | TODO |
Contributions are welcome! Please open an issue or pull request if you have any suggestions or bug reports.