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Pull requests: sourmash-bio/sourmash

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Pull requests list

WIP: add code to get matches w/o full signatures
#3863 opened Nov 26, 2025 by ctb Loading…
1
Build(ci): Bump pypa/cibuildwheel from 3.2.1 to 3.3.0 dependencies Pull requests that update a dependency file github_actions Pull requests that update GitHub Actions code
#3854 opened Nov 17, 2025 by dependabot bot Loading…
1
Build(ci): Bump DeterminateSystems/nix-installer-action from 20 to 21 dependencies Pull requests that update a dependency file github_actions Pull requests that update GitHub Actions code
#3853 opened Nov 17, 2025 by dependabot bot Loading…
1
Build(ci): Bump supercharge/redis-github-action from 1.8.0 to 1.8.1 dependencies Pull requests that update a dependency file github_actions Pull requests that update GitHub Actions code
#3852 opened Nov 17, 2025 by dependabot bot Loading…
1
[MRG] Adding picklist arg to sourmash_args.load_picklist to allow the option
#3839 opened Oct 23, 2025 by ccbaumler Loading…
1
2
[MRG] Lineage methods to allow easier pangenomic ranktable generation
#3837 opened Oct 22, 2025 by ccbaumler Loading…
3
Fix Laurent Gautier ORCID
#3832 opened Oct 15, 2025 by luizirber Loading…
1
Build(ci): Bump CodSpeedHQ/action from 3 to 4 dependencies Pull requests that update a dependency file github_actions Pull requests that update GitHub Actions code
#3808 opened Sep 8, 2025 by dependabot bot Loading…
2
MRG: add picklist to sig collect
#3805 opened Sep 4, 2025 by bluegenes Loading…
4
WIP: add exception for unkown manifest output format
#3804 opened Sep 4, 2025 by ctb Loading…
1
Implement a WortStorage backend
#3789 opened Aug 20, 2025 by luizirber • Draft
1
EXP: add bp_weighted_at_rank to tax output
#3716 opened Jun 29, 2025 by ctb Loading…
1
EXP: upgrade selection and other things in Rust
#3658 opened May 23, 2025 by ctb Loading…
1
CI: test debian package build
#3525 opened Feb 9, 2025 by luizirber • Draft
1
[EXP] use roaring bitmaps for MinHash
#3444 opened Dec 19, 2024 by luizirber • Draft
2
EXP: avoid cloning in gather, use iterators directly
#3394 opened Nov 12, 2024 by luizirber Loading…
1
EXP: Implement into_iter() on Collection
#3372 opened Nov 4, 2024 by ctb Loading…
remove match_
#3351 opened Oct 14, 2024 by luizirber • Draft
3
EXP: Added derives for mem-dbg
#3292 opened Aug 15, 2024 by LucaCappelletti94 Loading…
9
CI: enable codspeed for Python
#3262 opened Jul 25, 2024 by luizirber • Draft
2
Replace serde_json with simd_json
#3174 opened May 25, 2024 by luizirber • Draft
2
Remove methods that allocate, prefer iterators instead
#3056 opened Mar 3, 2024 by luizirber • Draft
1
WIP: add manifest summarization
#3030 opened Feb 22, 2024 by bluegenes Loading…
1
WIP: add plugins to docs
#3017 opened Feb 20, 2024 by ctb Loading…
1
replace piz with rc-zip
#3012 opened Feb 18, 2024 by luizirber • Draft
5
ProTip! Exclude everything labeled bug with -label:bug.