Skip to content
View ying-ge's full-sized avatar
🎯
Focusing
🎯
Focusing

Block or report ying-ge

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don't include any personal information such as legal names or email addresses. Markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
ying-ge/README.md
FigureYa Logo

Hi there, I'm Ying πŸ‘‹

I'm a bioinformatician and the creator of the FigureYa project.
I'm passionate about making biomedical data analysis more accessible, reproducible, and efficient for researchers worldwide.

πŸ‡¨πŸ‡³ δΈ­ζ–‡η‰ˆδ»‹η»θ―·η‚Ήε‡»θΏ™ι‡Œ


πŸ”­ My Main Project: FigureYa

FigureYa is a comprehensive biomedical data visualization framework providing 300+ standardized R Markdown templates for creating scientific figures. It is designed to empower researchers in genomics, transcriptomics, proteomics, and clinical studies.

✨ Key Features of FigureYa:

  • Reproducible Science: Built on R Markdown to ensure every analysis is transparent and repeatable.
  • Self-Contained Modules: Each of the 300+ modules is independent, with automatic dependency installation.
  • Standardized Inputs: Easily use your own data with the provided easy_input_*.csv templates.
  • Publication-Ready: Generates high-quality vector graphics (PDF) and interactive HTML reports.
  • Bilingual Documentation: Supports both English and Chinese to benefit a global community.

The project is a testament to my belief in open science and the power of well-documented, reusable code.

🌱 I'm Currently Focusing On

  • Expanding the FigureYa library with more analysis modules.
  • Improving the framework's automation and user experience.
  • Exploring new visualization techniques in bioinformatics.

πŸ’» My Tech Stack

  • Primary Languages: R (with R Markdown, ggplot2, Bioconductor), Python
  • Web Technologies: HTML, JavaScript
  • Automation: GitHub Actions
  • Tools: Cursor, VS Code, Git

Thanks for visiting my profile!


"Making complex data beautiful and reproducible."

Pinned Loading

  1. FigureYa FigureYa Public

    HTML 322 216

  2. FigureYa-Actions FigureYa-Actions Public

    Workflows and scripts from the FigureYa project that can be run directly on GitHub Actions, without requiring local data dependencies.

    HTML 10 25

  3. FigureYa-compressed FigureYa-compressed Public

    All FigureYa modules are available as individually compressed zip files for convenient offline use.

    13 7

  4. FigureYa-Games FigureYa-Games Public

    Educational web games combining academic research with entertainment, powered by FigureYa scientific visualization thumbnails.

    HTML